Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Gm6114-201ENSMUST00000182472 968 ntBASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm27516-201ENSMUST00000184237 98 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm8420-201ENSMUST00000097103 598 ntBASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh9F8VPK8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms