Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Gm43244-201ENSMUST00000196994 1285 ntBASIC16■□□□□ 0.15
Chd2E9PZM4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16■□□□□ 0.15
Chd2E9PZM4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Chd2E9PZM4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd2E9PZM4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd2E9PZM4 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Chd2E9PZM4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd2E9PZM4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm18014-201ENSMUST00000183369 817 ntBASIC15.99■□□□□ 0.15
Chd2E9PZM4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm44605-201ENSMUST00000206892 949 ntBASIC15.99■□□□□ 0.15
Chd2E9PZM4 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.99■□□□□ 0.15
Chd2E9PZM4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm38192-201ENSMUST00000194364 1847 ntBASIC15.99■□□□□ 0.15
Chd2E9PZM4 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd2E9PZM4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm4462-201ENSMUST00000166453 492 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm19246-201ENSMUST00000173599 255 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 AC164099.1-201ENSMUST00000227780 333 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm44740-201ENSMUST00000205603 1614 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm15617-201ENSMUST00000118973 771 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm37723-201ENSMUST00000194480 565 ntBASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd2E9PZM4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Gm15625-201ENSMUST00000117617 1093 ntBASIC15.97■□□□□ 0.15
Chd2E9PZM4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chd2E9PZM4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 3689.8 ms