Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmf1B9EKI3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Tmf1B9EKI3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm13045-201ENSMUST00000119019 712 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm13263-201ENSMUST00000121271 838 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm6867-201ENSMUST00000219165 425 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Spcs1-203ENSMUST00000226374 592 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm1821-202ENSMUST00000227415 750 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmf1B9EKI3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm7104-201ENSMUST00000179741 2532 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm28937-201ENSMUST00000185413 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm29400-201ENSMUST00000187208 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm28662-201ENSMUST00000188446 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm28251-201ENSMUST00000188835 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm37318-201ENSMUST00000194325 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm38017-201ENSMUST00000194768 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm37287-201ENSMUST00000195449 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm37793-201ENSMUST00000195548 695 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm9555-201ENSMUST00000200908 583 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Ntng1-201ENSMUST00000051253 327 ntBASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmf1B9EKI3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms