Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.05□□□□□ -0.48
Col4a6B1AVK5 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col4a6B1AVK5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Gm43249-201ENSMUST00000200464 458 ntBASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.04□□□□□ -0.48
Col4a6B1AVK5 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col4a6B1AVK5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm15196-201ENSMUST00000121406 482 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Capsl-202ENSMUST00000226688 739 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms