Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm7467-201ENSMUST00000185173 652 ntBASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm12176-201ENSMUST00000121420 875 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Gm45770-201ENSMUST00000212105 616 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcb1Q9Z0H3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm45550-201ENSMUST00000209380 946 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.4□□□□□ -0.42
Smarcb1Q9Z0H3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms