Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm14942-201ENSMUST00000119642 336 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SrfQ9JM73 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm26047-201ENSMUST00000157308 113 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm12407-201ENSMUST00000180219 324 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm37024-201ENSMUST00000192224 868 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm37028-201ENSMUST00000194276 107 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm37809-201ENSMUST00000195050 931 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm26047-202ENSMUST00000198840 115 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm3793-201ENSMUST00000204973 672 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.44□□□□□ -0.58
SrfQ9JM73 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.44□□□□□ -0.58
SrfQ9JM73 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SrfQ9JM73 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Mir706-201ENSMUST00000102262 84 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm24844-201ENSMUST00000158679 127 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm37973-201ENSMUST00000195767 1289 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm19009-201ENSMUST00000223072 823 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Zfp865-202ENSMUST00000076791 1129 ntBASIC11.43□□□□□ -0.58
SrfQ9JM73 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SrfQ9JM73 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SrfQ9JM73 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms