Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm4034-201ENSMUST00000187674 480 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm2651-201ENSMUST00000203560 838 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm6447-201ENSMUST00000118905 835 ntBASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm45612-201ENSMUST00000211320 160 ntBASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.53□□□□□ -0.88
Smco4Q9JIS3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Smco4Q9JIS3 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm11745-201ENSMUST00000121669 448 ntBASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms