Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Rprl1-201ENSMUST00000158050 327 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm43133-201ENSMUST00000197472 463 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm45880-201ENSMUST00000213041 853 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm25857-201ENSMUST00000082788 129 ntBASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccl28Q9JIL2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl28Q9JIL2 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Rgr-203ENSMUST00000225070 4704 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm37424-201ENSMUST00000191727 561 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm38002-201ENSMUST00000193255 180 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm42693-201ENSMUST00000196779 631 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl28Q9JIL2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl28Q9JIL2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl28Q9JIL2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl28Q9JIL2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms