Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm25116-201ENSMUST00000157191 122 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm10774-201ENSMUST00000188689 204 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3bQ9ES34 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm12579-201ENSMUST00000118040 783 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm28937-201ENSMUST00000185413 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm29400-201ENSMUST00000187208 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm28662-201ENSMUST00000188446 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm28251-201ENSMUST00000188835 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm37318-201ENSMUST00000194325 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm38017-201ENSMUST00000194768 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm37287-201ENSMUST00000195449 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm37793-201ENSMUST00000195548 695 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3bQ9ES34 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms