Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm22018-201ENSMUST00000104357 131 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm9083-201ENSMUST00000120423 819 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm23119-201ENSMUST00000158610 140 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm5370-201ENSMUST00000187187 574 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm37008-201ENSMUST00000195712 319 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm25857-201ENSMUST00000082788 129 ntBASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lima1Q9ERG0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm5187-201ENSMUST00000117317 991 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm13315-201ENSMUST00000120376 991 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Lima1Q9ERG0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lima1Q9ERG0 Gm13736-201ENSMUST00000119272 253 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms