Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm14130-201ENSMUST00000118417 987 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm14999-201ENSMUST00000121039 624 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm18827-201ENSMUST00000188341 790 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Gm8712-201ENSMUST00000221090 701 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb3Q9ERD7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tubb3Q9ERD7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tubb3Q9ERD7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tubb3Q9ERD7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Tubb3Q9ERD7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tubb3Q9ERD7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tubb3Q9ERD7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms