Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm6218-201ENSMUST00000219812 628 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm37447-201ENSMUST00000195625 2928 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim42Q9D2H5 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim42Q9D2H5 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trim42Q9D2H5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm13492-201ENSMUST00000119772 665 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm18624-201ENSMUST00000220966 658 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim42Q9D2H5 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.01□□□□□ -0.49
Trim42Q9D2H5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms