Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm5187-201ENSMUST00000117317 991 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm11531-201ENSMUST00000117614 555 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Snora78-201ENSMUST00000158630 128 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm42627-201ENSMUST00000197347 224 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm43118-201ENSMUST00000199149 775 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.05□□□□□ -0.16
Smc3Q9CW03 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc3Q9CW03 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smc3Q9CW03 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm38002-201ENSMUST00000193255 180 ntBASIC14.04□□□□□ -0.16
Smc3Q9CW03 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.04□□□□□ -0.16
Smc3Q9CW03 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.04□□□□□ -0.16
Smc3Q9CW03 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.04□□□□□ -0.16
Smc3Q9CW03 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gm25214-201ENSMUST00000104573 129 ntBASIC14.03□□□□□ -0.16
Smc3Q9CW03 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc3Q9CW03 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms