Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
H2afb1Q9CQ70 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H2afb1Q9CQ70 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
H2afb1Q9CQ70 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H2afb1Q9CQ70 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
H2afb1Q9CQ70 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm13297-201ENSMUST00000120205 934 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm6013-201ENSMUST00000212264 699 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gm10312-201ENSMUST00000078515 489 ntBASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H2afb1Q9CQ70 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm25214-201ENSMUST00000104573 129 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm11222-201ENSMUST00000119005 738 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm17931-201ENSMUST00000208132 634 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm10608-202ENSMUST00000213924 676 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Rgr-203ENSMUST00000225070 4704 ntBASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H2afb1Q9CQ70 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms