Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim11Q99PQ2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim11Q99PQ2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm11930-201ENSMUST00000117788 190 ntBASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim11Q99PQ2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm19187-201ENSMUST00000206781 892 ntBASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim11Q99PQ2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim11Q99PQ2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms