Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm23931-201ENSMUST00000103842 109 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm4986-201ENSMUST00000119731 549 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdk5rap3Q99LM2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdk5rap3Q99LM2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm15610-201ENSMUST00000120584 195 ntBASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Mospd4-201ENSMUST00000180618 576 ntBASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm43133-201ENSMUST00000197472 463 ntBASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk5rap3Q99LM2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm5950-201ENSMUST00000213337 772 ntBASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms