Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm9823-201ENSMUST00000051212 327 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cstf3Q99LI7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cstf3Q99LI7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm17420-201ENSMUST00000164753 153 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm26956-201ENSMUST00000182176 986 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm27572-201ENSMUST00000183702 255 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm6013-201ENSMUST00000212264 699 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cstf3Q99LI7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm12742-201ENSMUST00000117326 410 ntBASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm15610-201ENSMUST00000120584 195 ntBASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms