Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.74□□□□□ -0.05
RtcbQ99LF4 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.74□□□□□ -0.05
RtcbQ99LF4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RtcbQ99LF4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RtcbQ99LF4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RtcbQ99LF4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RtcbQ99LF4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.73□□□□□ -0.05
RtcbQ99LF4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm13351-201ENSMUST00000118087 414 ntBASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.73□□□□□ -0.05
RtcbQ99LF4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RtcbQ99LF4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm11354-201ENSMUST00000121974 422 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.72□□□□□ -0.05
RtcbQ99LF4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.72□□□□□ -0.05
RtcbQ99LF4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm8451-201ENSMUST00000170338 447 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms