Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp11Q99K46 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp11Q99K46 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Mir6420-201ENSMUST00000185032 102 ntBASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.63□□□□□ -0.39
Usp11Q99K46 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Usp11Q99K46 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp11Q99K46 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp11Q99K46 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Gm7584-201ENSMUST00000175829 940 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.62□□□□□ -0.39
Usp11Q99K46 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp11Q99K46 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usp11Q99K46 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp11Q99K46 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp11Q99K46 Gm22323-201ENSMUST00000103832 109 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms