Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm29199-201ENSMUST00000187766 775 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm13996-201ENSMUST00000118456 430 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm14247-201ENSMUST00000120950 237 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.54□□□□□ -0.4
Pcdha3Q91Y16 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha3Q91Y16 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms