Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm13665-201ENSMUST00000120830 528 ntBASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm27320-201ENSMUST00000184892 109 ntBASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb1Q91Y08 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm19287-201ENSMUST00000203190 358 ntBASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb1Q91Y08 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Gm26286-201ENSMUST00000104166 134 ntBASIC12.41□□□□□ -0.42
Pcdhb1Q91Y08 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms