Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Gm7150-201ENSMUST00000122032 981 ntBASIC13.67□□□□□ -0.22
Trex1Q91XB0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Gm28388-201ENSMUST00000186262 437 ntBASIC13.67□□□□□ -0.22
Trex1Q91XB0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.67□□□□□ -0.22
Trex1Q91XB0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.67□□□□□ -0.22
Trex1Q91XB0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.67□□□□□ -0.22
Trex1Q91XB0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trex1Q91XB0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm12516-201ENSMUST00000120819 385 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Mir1901-201ENSMUST00000122616 78 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm3551-201ENSMUST00000190750 664 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm37905-201ENSMUST00000195310 341 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm6108-201ENSMUST00000208365 367 ntBASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trex1Q91XB0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm12419-201ENSMUST00000116649 636 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm8459-201ENSMUST00000162504 760 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm23153-201ENSMUST00000175323 313 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gm43058-201ENSMUST00000197645 625 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms