Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm24934-201ENSMUST00000103764 111 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm23949-201ENSMUST00000104027 127 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm22902-201ENSMUST00000158488 302 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm27627-201ENSMUST00000183644 150 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm27390-201ENSMUST00000184516 176 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 AU022133-201ENSMUST00000200601 873 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm35960-201ENSMUST00000202712 767 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx41Q91VN6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx41Q91VN6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx41Q91VN6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx41Q91VN6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx41Q91VN6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx41Q91VN6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm12176-201ENSMUST00000121420 875 ntBASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Mir3547-201ENSMUST00000175461 88 ntBASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx41Q91VN6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Ddx41Q91VN6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 117.6 ms