Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm27501-201ENSMUST00000183599 107 ntBASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm10312-201ENSMUST00000078515 489 ntBASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.03□□□□□ -0.8
H1fooQ8VIK3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
H1fooQ8VIK3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.02□□□□□ -0.8
H1fooQ8VIK3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm11222-201ENSMUST00000119005 738 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm14247-201ENSMUST00000120950 237 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm15547-201ENSMUST00000122152 333 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm2991-201ENSMUST00000173338 480 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm19994-201ENSMUST00000217086 586 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm9368-201ENSMUST00000219348 831 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Gm7399-201ENSMUST00000032395 858 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
H1fooQ8VIK3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms