Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm25214-201ENSMUST00000104573 129 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm12742-201ENSMUST00000117326 410 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm8062-201ENSMUST00000139696 444 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm27572-201ENSMUST00000183702 255 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm19994-201ENSMUST00000217086 586 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Gm10312-201ENSMUST00000078515 489 ntBASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps39Q8R5L3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm15370-201ENSMUST00000117158 253 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm12957-201ENSMUST00000117835 377 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm11222-201ENSMUST00000119005 738 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm17420-201ENSMUST00000164753 153 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Olfr284-202ENSMUST00000206647 966 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps39Q8R5L3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms