Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.11□□□□□ -0.15
Atf7Q8R0S1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm15004-201ENSMUST00000119192 630 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm25890-201ENSMUST00000177643 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm22614-201ENSMUST00000178300 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm19287-201ENSMUST00000203190 358 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm22042-201ENSMUST00000082989 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Gm26110-201ENSMUST00000083971 165 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf7Q8R0S1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm25668-201ENSMUST00000157700 129 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf7Q8R0S1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms