Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Sf3a1Q8K4Z5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.66□□□□□ -0.06
Sf3a1Q8K4Z5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sf3a1Q8K4Z5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3a1Q8K4Z5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3a1Q8K4Z5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm8956-201ENSMUST00000203939 825 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm17827-201ENSMUST00000211825 742 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.65□□□□□ -0.06
Sf3a1Q8K4Z5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm23949-201ENSMUST00000104027 127 ntBASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm12380-201ENSMUST00000119012 544 ntBASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm29199-201ENSMUST00000187766 775 ntBASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.64□□□□□ -0.07
Sf3a1Q8K4Z5 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Gm12997-201ENSMUST00000120207 640 ntBASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sf3a1Q8K4Z5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms