Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Gm8420-201ENSMUST00000097103 598 ntBASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28aQ8CEI3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.58□□□□□ -0.39
Ccdc28aQ8CEI3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28aQ8CEI3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28aQ8CEI3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28aQ8CEI3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28aQ8CEI3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28aQ8CEI3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28aQ8CEI3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms