Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.33□□□□□ -0.43
Trub1Q8C0D0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.43
Trub1Q8C0D0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trub1Q8C0D0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm27320-201ENSMUST00000184892 109 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trub1Q8C0D0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Gm26286-201ENSMUST00000104166 134 ntBASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trub1Q8C0D0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms