Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm13916-201ENSMUST00000117368 628 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm15881-201ENSMUST00000148792 942 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm38117-201ENSMUST00000194653 939 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm5714-201ENSMUST00000197343 566 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sh3rf2Q8BZT2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm11956-201ENSMUST00000119525 512 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm12029-201ENSMUST00000120073 832 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm4726-201ENSMUST00000135604 736 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm6019-201ENSMUST00000148369 736 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9132-201ENSMUST00000210182 832 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh3rf2Q8BZT2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms