Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm23119-201ENSMUST00000158610 140 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm25890-201ENSMUST00000177643 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm22614-201ENSMUST00000178300 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm27046-201ENSMUST00000182160 463 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm3096-201ENSMUST00000185770 364 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm22042-201ENSMUST00000082989 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm26232-201ENSMUST00000083360 166 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm26110-201ENSMUST00000083971 165 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm14109-201ENSMUST00000118814 309 ntBASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4Q8BQZ5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.59□□□□□ -0.55
Cpsf4Q8BQZ5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpsf4Q8BQZ5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpsf4Q8BQZ5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpsf4Q8BQZ5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cpsf4Q8BQZ5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms