Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2bQ8BJF9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2bQ8BJF9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2bQ8BJF9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm6023-201ENSMUST00000118217 606 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms