Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Pck2-205ENSMUST00000226352 2784 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.87□□□□□ -0.51
Ubp1Q811S7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.87□□□□□ -0.51
Ubp1Q811S7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.87□□□□□ -0.51
Ubp1Q811S7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubp1Q811S7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.86□□□□□ -0.51
Ubp1Q811S7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ubp1Q811S7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubp1Q811S7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms