Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm5419-201ENSMUST00000119301 527 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm13665-201ENSMUST00000120830 528 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm25890-201ENSMUST00000177643 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm22614-201ENSMUST00000178300 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim50Q810I2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm22042-201ENSMUST00000082989 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm26110-201ENSMUST00000083971 165 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.67□□□□□ -0.54
Trim50Q810I2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim50Q810I2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.66□□□□□ -0.54
Trim50Q810I2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm25668-201ENSMUST00000157700 129 ntBASIC11.66□□□□□ -0.54
Trim50Q810I2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.66□□□□□ -0.54
Trim50Q810I2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim50Q810I2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.66□□□□□ -0.54
Trim50Q810I2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim50Q810I2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim50Q810I2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms