Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm17073-201ENSMUST00000168069 556 ntBASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 CT030135.2-201ENSMUST00000225255 893 ntBASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Gm43167-201ENSMUST00000202001 1606 ntBASIC16.49■□□□□ 0.23
Topbp1Q6ZQF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Gm25580-201ENSMUST00000083409 327 ntBASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Topbp1Q6ZQF0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm23647-201ENSMUST00000175042 109 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Rn5s-201ENSMUST00000177555 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s108-201ENSMUST00000177575 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s121-201ENSMUST00000177589 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s146-201ENSMUST00000177889 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm22109-201ENSMUST00000177995 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm22291-201ENSMUST00000178027 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s141-201ENSMUST00000178066 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm23284-201ENSMUST00000178069 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s100-201ENSMUST00000178106 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s111-201ENSMUST00000178203 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s105-201ENSMUST00000178499 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s149-201ENSMUST00000178520 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s103-201ENSMUST00000178755 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s123-201ENSMUST00000178804 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s142-201ENSMUST00000178820 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s144-201ENSMUST00000178859 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s139-201ENSMUST00000178975 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s134-201ENSMUST00000178983 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s136-201ENSMUST00000179080 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm25018-201ENSMUST00000179081 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s104-201ENSMUST00000179107 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s113-201ENSMUST00000179143 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s133-201ENSMUST00000179275 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s117-201ENSMUST00000179431 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm25212-201ENSMUST00000179432 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s138-201ENSMUST00000179476 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s122-201ENSMUST00000179500 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s143-201ENSMUST00000179542 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s107-201ENSMUST00000179704 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm26391-201ENSMUST00000179843 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s110-201ENSMUST00000179995 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s128-201ENSMUST00000180096 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 n-R5s124-201ENSMUST00000180334 119 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 AC134601.2-201ENSMUST00000221071 130 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm7589-201ENSMUST00000085631 534 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm24089-201ENSMUST00000093696 109 ntBASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.47■□□□□ 0.23
Topbp1Q6ZQF0 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Topbp1Q6ZQF0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms