Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm11700-201ENSMUST00000119409 403 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm12791-201ENSMUST00000120788 655 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm6407-201ENSMUST00000176468 549 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm18776-201ENSMUST00000188833 654 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gm18059-201ENSMUST00000208073 580 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.87□□□□□ -0.19
Nup98Q6PFD9 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup98Q6PFD9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm24992-201ENSMUST00000157412 130 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm43002-201ENSMUST00000200310 155 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup98Q6PFD9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm11500-201ENSMUST00000118237 601 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm10263-201ENSMUST00000085163 300 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms