Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm14585-201ENSMUST00000120713 634 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm8737-201ENSMUST00000122208 642 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm3150-201ENSMUST00000166418 204 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm23045-201ENSMUST00000175041 96 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm12407-201ENSMUST00000180219 324 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm5982-201ENSMUST00000196234 512 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm44126-201ENSMUST00000204831 514 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm44506-201ENSMUST00000206278 965 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm8285-201ENSMUST00000208293 759 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt40Q6IFX3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Gm10807-201ENSMUST00000177134 795 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Mir8115-201ENSMUST00000184992 119 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Gm9132-201ENSMUST00000210182 832 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt40Q6IFX3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Krt40Q6IFX3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm12029-201ENSMUST00000120073 832 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm8459-201ENSMUST00000162504 760 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm18367-201ENSMUST00000176139 600 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Mir8093-201ENSMUST00000185043 137 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt40Q6IFX3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms