Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.72□□□□□ -0.53
Sim2Q61079 Gm9135-201ENSMUST00000182963 990 ntBASIC11.72□□□□□ -0.53
Sim2Q61079 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Gm2553-201ENSMUST00000215986 605 ntBASIC11.72□□□□□ -0.53
Sim2Q61079 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sim2Q61079 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sim2Q61079 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sim2Q61079 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Sim2Q61079 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.71□□□□□ -0.53
Sim2Q61079 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sim2Q61079 Gm22711-201ENSMUST00000116890 133 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Gm15004-201ENSMUST00000119192 630 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Gm24844-201ENSMUST00000158679 127 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Gm18367-201ENSMUST00000176139 600 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Gm12407-201ENSMUST00000180219 324 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Mir6407-201ENSMUST00000184510 101 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.71□□□□□ -0.53
Sim2Q61079 Gm18204-201ENSMUST00000209835 793 ntBASIC11.71□□□□□ -0.53
Sim2Q61079 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sim2Q61079 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sim2Q61079 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sim2Q61079 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sim2Q61079 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.7□□□□□ -0.54
Sim2Q61079 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.7□□□□□ -0.54
Sim2Q61079 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms