Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Rprl1-201ENSMUST00000158050 327 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.04□□□□□ -0.64
Urb1Q571H0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm13916-201ENSMUST00000117368 628 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm12579-201ENSMUST00000118040 783 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm1848-201ENSMUST00000120711 789 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Mir6998-201ENSMUST00000183343 64 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm5100-201ENSMUST00000195631 589 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Gm5705-201ENSMUST00000066241 711 ntBASIC11.04□□□□□ -0.64
Urb1Q571H0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Urb1Q571H0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Urb1Q571H0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm12516-201ENSMUST00000120819 385 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm13182-201ENSMUST00000122241 312 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.03□□□□□ -0.64
Urb1Q571H0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.03□□□□□ -0.64
Urb1Q571H0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Urb1Q571H0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Urb1Q571H0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.02□□□□□ -0.64
Urb1Q571H0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.02□□□□□ -0.64
Urb1Q571H0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.02□□□□□ -0.64
Urb1Q571H0 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.02□□□□□ -0.64
Urb1Q571H0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.02□□□□□ -0.64
Urb1Q571H0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Urb1Q571H0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Urb1Q571H0 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Urb1Q571H0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Urb1Q571H0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms