Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm23931-201ENSMUST00000103842 109 ntBASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm11591-201ENSMUST00000120063 702 ntBASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm14247-201ENSMUST00000120950 237 ntBASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm18711-201ENSMUST00000199341 750 ntBASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm45331-201ENSMUST00000209868 554 ntBASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43aQ3TL54 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms