Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm28071-201ENSMUST00000190355 478 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Spcs1-203ENSMUST00000226374 592 ntBASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Khdc4Q3TCX3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm23949-201ENSMUST00000104027 127 ntBASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm12616-201ENSMUST00000118594 382 ntBASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm12380-201ENSMUST00000119012 544 ntBASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Khdc4Q3TCX3 Gm18734-201ENSMUST00000172937 808 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms