Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Mir6930-201ENSMUST00000183859 68 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm5738-201ENSMUST00000206016 779 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm15703-201ENSMUST00000120250 880 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm26976-201ENSMUST00000182929 908 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm8707-201ENSMUST00000183325 980 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Mir683-2-201ENSMUST00000102099 109 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Mir683-1-201ENSMUST00000179371 109 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm19931-201ENSMUST00000198920 368 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Gm8956-201ENSMUST00000203939 825 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd8Q09XV5 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.66□□□□□ -0.7
Chd8Q09XV5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.65□□□□□ -0.7
Chd8Q09XV5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.65□□□□□ -0.7
Chd8Q09XV5 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.65□□□□□ -0.7
Chd8Q09XV5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.65□□□□□ -0.7
Chd8Q09XV5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd8Q09XV5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms