Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gm10774-201ENSMUST00000188689 204 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gm2965-201ENSMUST00000198365 343 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.17□□□□□ -0.46
Ebf1Q07802 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.17□□□□□ -0.46
Ebf1Q07802 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.16□□□□□ -0.46
Ebf1Q07802 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Gm4157-201ENSMUST00000211647 679 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Ebf1Q07802 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf1Q07802 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.16□□□□□ -0.46
Ebf1Q07802 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf1Q07802 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ebf1Q07802 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.15□□□□□ -0.46
Ebf1Q07802 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf1Q07802 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf1Q07802 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms