Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm14726-201ENSMUST00000120623 896 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm24845-201ENSMUST00000158034 109 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm27501-201ENSMUST00000183599 107 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.05□□□□□ -0.48
Pfdn6Q03958 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm25214-201ENSMUST00000104573 129 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm38241-201ENSMUST00000192641 898 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm21769-201ENSMUST00000211922 111 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.04□□□□□ -0.48
Pfdn6Q03958 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pfdn6Q03958 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn6Q03958 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms