Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm12380-201ENSMUST00000119012 544 ntBASIC13.01□□□□□ -0.33
Trim43cP86449 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim43cP86449 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43cP86449 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.01□□□□□ -0.33
Trim43cP86449 Gm17812-201ENSMUST00000204935 318 ntBASIC13.01□□□□□ -0.33
Trim43cP86449 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim43cP86449 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43cP86449 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43cP86449 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim43cP86449 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43cP86449 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim43cP86449 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13□□□□□ -0.33
Trim43cP86449 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Gm38194-201ENSMUST00000194529 2211 ntBASIC13□□□□□ -0.33
Trim43cP86449 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13□□□□□ -0.33
Trim43cP86449 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim43cP86449 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13□□□□□ -0.33
Trim43cP86449 Gm24749-201ENSMUST00000157838 343 ntBASIC13□□□□□ -0.33
Trim43cP86449 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13□□□□□ -0.33
Trim43cP86449 Gm5705-201ENSMUST00000066241 711 ntBASIC13□□□□□ -0.33
Trim43cP86449 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13□□□□□ -0.33
Trim43cP86449 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim43cP86449 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43cP86449 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim43cP86449 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trim43cP86449 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Gm23949-201ENSMUST00000104027 127 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim43cP86449 Gm8343-201ENSMUST00000182705 994 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43cP86449 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim43cP86449 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43cP86449 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim43cP86449 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43cP86449 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43cP86449 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.99□□□□□ -0.33
Trim43cP86449 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms