Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.8□□□□□ -0.52
Shox2P70390 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shox2P70390 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shox2P70390 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Shox2P70390 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Gm27397-201ENSMUST00000184997 107 ntBASIC11.8□□□□□ -0.52
Shox2P70390 Gm37497-201ENSMUST00000195830 798 ntBASIC11.8□□□□□ -0.52
Shox2P70390 Gm42612-201ENSMUST00000197986 623 ntBASIC11.8□□□□□ -0.52
Shox2P70390 Gm43170-201ENSMUST00000199827 612 ntBASIC11.8□□□□□ -0.52
Shox2P70390 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.8□□□□□ -0.52
Shox2P70390 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shox2P70390 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shox2P70390 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shox2P70390 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.8□□□□□ -0.52
Shox2P70390 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shox2P70390 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.79□□□□□ -0.52
Shox2P70390 Gm15920-201ENSMUST00000118998 402 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Gm14719-201ENSMUST00000121891 340 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Gm38241-201ENSMUST00000192641 898 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.79□□□□□ -0.52
Shox2P70390 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Shox2P70390 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Shox2P70390 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shox2P70390 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Shox2P70390 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shox2P70390 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Gm23935-201ENSMUST00000102303 57 ntBASIC11.78□□□□□ -0.52
Shox2P70390 Gm24270-201ENSMUST00000102326 57 ntBASIC11.78□□□□□ -0.52
Shox2P70390 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Shox2P70390 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.78□□□□□ -0.52
Shox2P70390 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Gm24245-201ENSMUST00000157318 57 ntBASIC11.78□□□□□ -0.52
Shox2P70390 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shox2P70390 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shox2P70390 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.78□□□□□ -0.52
Shox2P70390 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.78□□□□□ -0.52
Shox2P70390 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shox2P70390 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shox2P70390 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms