Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rpl27P61358 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rpl27P61358 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Rpl27P61358 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rpl27P61358 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.68□□□□□ -0.7
Rpl27P61358 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.67□□□□□ -0.7
Rpl27P61358 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.67□□□□□ -0.7
Rpl27P61358 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Rpl27P61358 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm6963-201ENSMUST00000147879 379 ntBASIC10.67□□□□□ -0.7
Rpl27P61358 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.67□□□□□ -0.7
Rpl27P61358 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.67□□□□□ -0.7
Rpl27P61358 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.67□□□□□ -0.7
Rpl27P61358 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.67□□□□□ -0.7
Rpl27P61358 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.67□□□□□ -0.7
Rpl27P61358 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.67□□□□□ -0.7
Rpl27P61358 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rpl27P61358 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rpl27P61358 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.66□□□□□ -0.7
Rpl27P61358 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rpl27P61358 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.66□□□□□ -0.7
Rpl27P61358 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.66□□□□□ -0.7
Rpl27P61358 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 Gm38266-201ENSMUST00000194931 421 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.66□□□□□ -0.7
Rpl27P61358 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gzmn-202ENSMUST00000225535 989 ntBASIC10.66□□□□□ -0.7
Rpl27P61358 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rpl27P61358 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rpl27P61358 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rpl27P61358 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rpl27P61358 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms