Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
Cdh11P55288 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm24255-201ENSMUST00000104481 128 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Mir877-201ENSMUST00000104738 85 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm16296-201ENSMUST00000159905 325 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm4857-201ENSMUST00000192718 785 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdh11P55288 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm6082-201ENSMUST00000215204 454 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh11P55288 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh11P55288 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.93□□□□□ -0.66
Cdh11P55288 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.92□□□□□ -0.66
Cdh11P55288 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm15808-201ENSMUST00000119046 604 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm17376-201ENSMUST00000166016 84 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm30285-201ENSMUST00000214614 422 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm22058-201ENSMUST00000083393 310 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cdh11P55288 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.92□□□□□ -0.66
Cdh11P55288 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdh11P55288 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdh11P55288 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdh11P55288 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Cdh11P55288 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh11P55288 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdh11P55288 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh11P55288 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh11P55288 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdh11P55288 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms