Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Msh6P54276 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.09■□□□□ 0.01
Msh6P54276 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Msh6P54276 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.09■□□□□ 0.01
Msh6P54276 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm15744-201ENSMUST00000161734 213 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Msh6P54276 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm9139-201ENSMUST00000218817 700 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.09■□□□□ 0.01
Msh6P54276 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Msh6P54276 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Msh6P54276 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Msh6P54276 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Msh6P54276 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Msh6P54276 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Msh6P54276 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
Msh6P54276 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Msh6P54276 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Gm11801-201ENSMUST00000117807 746 ntBASIC15.08■□□□□ 0
Msh6P54276 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.08■□□□□ 0
Msh6P54276 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC15.08■□□□□ 0
Msh6P54276 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.08■□□□□ 0
Msh6P54276 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Msh6P54276 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.08■□□□□ 0
Msh6P54276 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.07■□□□□ 0
Msh6P54276 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.07■□□□□ 0
Msh6P54276 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Msh6P54276 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.07■□□□□ 0
Msh6P54276 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.07■□□□□ 0
Msh6P54276 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.07■□□□□ 0
Msh6P54276 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm22877-201ENSMUST00000175451 105 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm6114-201ENSMUST00000182472 968 ntBASIC15.07■□□□□ 0
Msh6P54276 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Msh6P54276 Gm28937-201ENSMUST00000185413 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm29400-201ENSMUST00000187208 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm28662-201ENSMUST00000188446 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm28251-201ENSMUST00000188835 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm37318-201ENSMUST00000194325 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm38017-201ENSMUST00000194768 695 ntBASIC15.07■□□□□ 0
Msh6P54276 Gm37287-201ENSMUST00000195449 695 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms