Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gm10434-201ENSMUST00000101158 471 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Mir1247-201ENSMUST00000116706 82 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Gm5370-201ENSMUST00000187187 574 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.23□□□□□ -0.45
SftpbP50405 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SftpbP50405 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SftpbP50405 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.22□□□□□ -0.45
SftpbP50405 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.22□□□□□ -0.45
SftpbP50405 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
SftpbP50405 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm27514-201ENSMUST00000183692 110 ntBASIC12.22□□□□□ -0.45
SftpbP50405 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.22□□□□□ -0.45
SftpbP50405 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.22□□□□□ -0.45
SftpbP50405 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.22□□□□□ -0.45
SftpbP50405 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SftpbP50405 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SftpbP50405 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.21□□□□□ -0.45
SftpbP50405 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.21□□□□□ -0.45
SftpbP50405 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Gm38158-201ENSMUST00000194617 339 ntBASIC12.21□□□□□ -0.45
SftpbP50405 Gm42693-201ENSMUST00000196779 631 ntBASIC12.21□□□□□ -0.45
SftpbP50405 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.21□□□□□ -0.45
SftpbP50405 Gm18711-201ENSMUST00000199341 750 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms